Slavisa Garic




Book Chapter
Bethwaite, B., Abramson, D., Bohnert, F., Garic, S., Enticott, C., Peachey, T., “Mixing the Grid and Clouds: High-throughput Science using the Nimrod Tool Family”, “Cloud Computing: Principles, Systems and Applications”, Eds Antonopoulos and Gillam, Springer, pp 219-237, ISBN: 978-1-84996-240-7, 2010. Abstract From 
Baldridge, K. K., Sudholt, W., Greenberg, J., Amoreira, C., Potier, Y., Altintas, I., Birnbaum, A., Abramson, D. A., Enticott, C. M., Garic, S., 2006, Cluster and grid infrastructure for computational chemistry and biochemistry, in Parallel Computing for Bioinformatics and Computational Biology, eds Albert Y. Zomaya, John Wiley & Sons, NJ USA and Canada, pp. 531-550. Abstract
International Conference
Killeen, N., Lohrey, J., Farrell, M., Liu, W., Garic, S., Abramson, D. and Nguyen, H. “Integration of modern data management practice with scientific workflows”, 8th IEEE International Conference on e-Science, October 8-12, 2012, Chicago, IL, USA. Abstract from IEEE Digital Library 
Nguyen, H and Abramson, D. Bethwaite, B., Dinh, M., Enticott, C., Firth, S., Garic, S., Harper, I., Lackmann, M., Russel, A.B.M, Schek, S. and Vail, M. “Integrating Scientific Workflows and Large Tiled Display Walls: Bridging the Visualization Divide”, Fourth International Workshop on Parallel Programming Models and Systems Software for High-End Computing (P2S2), co-located with 2011 International Conference on Parallel Processing (ICPP-2011), Taipei, Taiwan September 13-16, 2011. Abstract OptiPortal ICPP 2011.pdf
Sher, A., Cooling, M., Bethwaite, B., Tan, J., Peachey, T., Enticott, C., Garic, S., Gavaghan, D., Noble, D., Abramson, A., and Crampin, E. “A Global Sensitivity Tool For Cardiac Cell Model: Ionic Currents Balance and Hypertrophic IP3 Transients in Atrial and Ventricular Cell Models”, 32nd Annual International IEEE EMBS Conference of the IEEE Engineering in Medicine and Biology Society in Buenos Aires Sheraton Hotel, Buenos Aires, Argentina during August 31 - September 4, 2010. Abstract GlobalSensitivityToolforCardiacModelling.pdf
Russel, A.B.M., Abramson, D., Bethwaite, B., Dinh, M., Enticott, C., Firth, S., Garic, S., Harper, I., Lackmann, M., Schek, S. and Vail, M.: "An Abstract Virtual Instrument System for High Throughput Automatic Microscopy", Procedia Computer Science, Volume 1, Issue 1, ICCS (International Conference on Computational Science) 2010, May 2010, Pages 545-554, ISSN 1877-0509, DOI: 10.1016/j.procs.2010.04.058. Abstract ICCS2010-RusselAbramsonBDEFGHLSV.pdf
Bernabeu, M. O., Corrias, A, Pitt-Francis, J, Rodriguez, B, Bethwaite, B, Enticott, C, Garic, S, Peachey, T, Tan, J, Abramson, D, and Gavaghan, D B. “Grid computing simulations of ion channel block effects on the ECG using 3D anatomically-based models”, Computers and Cardiology, Park City, Utah, September 13-16, 2009. Abstract CinC2009_Bernabeu.pdf
Abramson D., Bethwaite B., Enticott C., Garic S., Peachey T., "Parameter Space Exploration using Scientific Workflows", ICCS 2009, Baton Rouge, Louisiana, May 2009 Abstract Nimrod-K ICCS09.pdf
Schmidberger, J., Bethwaite, B., Enticott, C., Bate, M., Androulakis, S., Faux, N., Reboul, C., Phan, J., Whisstock, J., Garic, S., Goscinski, W., Abramson, D., and Buckle, A., 2009, "High-throughput Protein Structure Determination Using Grid Computing", IEEE Workshop on High Performance Computational Biology , May 25, 2009, Rome, Italy, co-located with IPDPS 2009. Abstract HICOMB_Schmidberger_etal.pdf
Abramson, D, Bethwaite, B, Dinh, M, Enticott, C, Firth, S, Garic, S, Harper, I, Lackmann, M, Nguyen, H, Ramdas, T, Russel, A.B.M, Schek, S and Vail, M., ”Virtual Microscopy and Analysis using Scientific Workflows”, IEEE e-Science 2009, Dec 9 – 11th, Oxford, UK. Abstract microscopyeSci09.pdf
Abramson, D., Bethwaite, B., Enticott, C., Garic, S., Peachey, T., Michailova, A., Amirriazi, S., Chitters, R., "Robust Workflows for Science and Engineering". 2nd Workshop on Many-Task Computing on Grids and Supercomputers(MTAGS 2009), Portland, USA, 16 November 2009 Abstract MTAGS 2009 V4.pdf
Sher, A., Abramson, D, Enticott, C, Garic, S, Gavaghan, D., Noble, D., Noble, P., Peachey, T. “Incorporating local Ca2+ dynamics into single cell ventricular models using Nimrod/O”, ICCS 2008, Krakow, Poland, June 2008. Abstract iccs2008.pdf
Ayyub, S., Abramson, D., Enticott, C., Garic, S., Tan, J. “Executing Large Parameter Sweep Applications on a Multi-VO Testbed”, 7th IEEE International Symposium on Cluster Computing and the Grid, CCGrid 2007, Los Alamitos CA USA, pp 73 – 80 Abstract shahaan-PSA.pdf
Zheng, C., Abramson, D., Arzberger, P., Ayyub, S., Enticott, C., Garic, S., Katz, M., Kwak, J., Lee, B. S., Papadopoulos, P., Phatanapherom, S., Sriprayoonsakul, S., Tanaka, Y., Tanimura, Y., Tatebe, O., Uthayopas, P. “The PRAGMA Testbed: Building a Multi-Application International Grid”, Workshop on Grid Testbeds, 6th IEEE International Symposium on Cluster Computing and the Grid 16-19 May 2006, Singapore Abstract PRAGMATestbed.pdf
Journal Article
Abramson, D., Bethwaite, B., Enticott, C., Garic, S. and Peachey, T. “Parameter Exploration in Science and Engineering using Many-Task Computing”, Special issue of IEEE Transactions on Parallel and Distributed Systems on Many-Task Computing, June 2011, Volume: 22 Issue: 6, 960 – 973. Abstract manytaskcomp.pdf
Abramson, D., Bernabeu, M., Bethwaite, B., Burrage, K., Corrias, A., Enticott, C., Garic, S., Gavaghan, D., Peachey, T., Pitt-Francis, J., Pueyo, E., Rodriguez, B., Sher, A. and Tan, J. “High Throughput Cardiac Science on the Grid”, Special issue of Transactions of the Royal Society. Phil. Trans. R. Soc. A 2010 368, 3907-3923. Abstract
Abramson,D., Bethwaite, B., Enticott, C., Garic,S., Peachey, T., Michailova,A., Amirriazi, S., "Embedding optimization in computational science workflows", Elsevier, Journal of Computational Science 1, 2010, pp 41-47 Abstract JOCS15.pdf
Ayyub, S., Abramson, D., Enticott, C., Garic, S., Tan, J. “Fault-tolerant execution of large parameter sweep applications across multiple VOs with storage constraints”, Concurrency and Computation: Practice and Experience. Currently Online, 25/8/2008, Abstract fault_tolerant_shahaan.pdf
Zheng C, Katz M, Papadopoulos P, Abramson D, Ayyub S, Enticott C, Garic S, Goscinski W, Arzberger P, Lee B S, Phatanapherom S, Sriprayoonsakul S, Uthayopas P, Tanaka Y, Tanimura Y, Tatebe O. “Lessons Learned Through Driving Science Applications in the PRAGMA Grid.” Int. J. Web and Grid Services, Vol.3, No.3, pp 287- 312. 2007 Abstract Zheng_IJWGS.pdf
Sudholt, W., Baldridge, K., Abramson, D., Enticott, C. and Garic, S., “Application of grid computing to parameter sweeps and optimizations in molecular modeling”, Future Generation Computer Systems, 21 (2005), 27-35. Also appeared in International Conference on Computational Sciences, ICCS04, Krakow Poland, June 6 – 9, 2004. Abstract gamess2.pdf
Sudholt, W., Baldridge, K., Abramson, D., Enticott, C. and Garic, S. “Parameter Scan of an Effective Group Difference Pseudopotential Using Grid Computing”, New Generation Computing 22 (2004) 125-135 Abstract gamess.pdf

Publications: 21