David Abramson

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Australian Conference
Tan, J. and Abramson, D., "Optimizing Tunneled Grid Connectivity across Firewalls". 7th Australasian Symposium on Grid Computing and e-Research (AUSGRID 2009), Vol. 99. W. Kelly and P. Roe, Eds, Wellington, NZ, Jan 20th – 23rd, 2009. Abstract CRPITV99Tan.pdf
Chan, P. and Abramson, D. "A Programming Framework for Incremental Data Distribution in Iterative Applications." In: Proc. of the 2008 IEEE International Symposium on Parallel and Distributed Processing with Applications (ISPA-2008). 10-12 December 2008. Sydney, Australia. pp 244 – 251, IEEE Press ISBN 978-0-7695-3471-8. Abstract chan-abramson-Incremental.pdf
Abramson, D., Lowe, G. and Atkinson, P. “Are you interested in Computers and Electronics”, Fourth Australasian Computing Education Conference, 4 - 6 December 2000 Abstract smarthouse.pdf
Randall, M. and Abramson, D “A General Parallel TABU Search Algorithm for Combinatorial Optimisation Problems”, Proceedings of 1999 Parallel and Real Time Conference (PART-99), December 1999, Melbourne, pp 68 - 79. Abstract gentabu.pdf
Giles, S. and Abramson, D. “The Video Wall Project - Video Technology at the Leading Edge in Education”, Learning Technologies '99, 20 - 23 October, 1999 Noosa, Queensland. Abstract videowall.pdf
D. Abramson, I. Foster, J. Giddy, A. Lewis, R. Sosic, R. Sutherst, N. White, The Nimrod Computational Workbench: A Case Study in Desktop Metacomputing, Australian Computer Science Conference (ACSC 97), Macquarie University, Sydney, Feb 1997, pp 17 - 26 Abstract iway.pdf
Abramson, D, Logothetis, P., Randall, M and Postula, A. "Application Specific Computers for Combinatorial Optimisation", The Australian Computer Architecture Workshop, Sydney, Feb 1997, Springer-Verlag Singapore Pty. Ltd., Singapore, pp 29 - 43. Abstract appspec_comb.pdf
Abramson, D, de Silva, A, Randall, M and Postula, A. "Special Purpose Computer Architectures for High Speed Optimisation", Parallel and Real Time Computing conference (PART-95), pp 13 - 20, September, 1995, Perth Abstract part95.pdf
Lewis, A., Abramson D., Sosic R., Giddy J., "Tool-based Parameterisation : An Application Perspective", Computational Techniques and Applications Conference, Melbourne, July 1995 Abstract ctac.pdf
Abramson , D., Sosic , R., Giddy , J., Cope , M. "The Laboratory Bench: Distributed Computing for Parametised Simulations", 1994 Parallel Computing and Transputers Conference, Wollongong, Nov 94, pp 17 - 27. Abstract pcat.pdf
Abramson, D.A. , Dang, H. and Krisnamoorthy, M., (1994), Cooling Schedules for Simulated Annealing Based Scheduling Algorithms, Proceeding of the 17th Australian Computer Science Conference, pp 541 - 550. Univ of Caterbury, Christchurch, NZ, Jan 1994 Abstract coolsched_anneal.pdf
Abramson, D., Mills, G. and Perkins, S. "Parallelisation of a Genetic Algorithm for the Computation of Efficient Train Schedules", Proceedings of 1993 Parallel Computing and Transputers Conference, Brisbane, pp 139 - 149 Nov 1993, IOS Press Abstract genalg_trainsched.pdf
Abramson, D., Dang, H. and Krishnamoorthy, M. "Enhanced Simulated Annealing Through Linear Programming Preprocessing", The 12th National Conference of the Australian Society for Operations Research. Adelaide, July 7-9, 1993, pp 91- 114. Abstract enhanced_annealing.pdf
Jones, D., Hulskamp, J. and Abramson, D. "BABBAGE: A tool to facilitate the implementation of master-slave grid oriented applications on distributed computer systems", Proceedings of 1993 Parallel Computing and Transputers Conference, Brisbane, pp 350 - 359, Nov 1993. Abstract babbage_hulskamp.pdf
Abela, J., Abramson, D., Krishnamoorthy, M. De Silva, A and Mills, G. "Computing Optimal Schedules for Landing Aircraft", The 12th National Conference of the Australian Society for Operations Research. Adelaide, July 7-9, 1993, pp 71 - 90 Abstract asorpaper.pdf
De Silva, A. and Abramson, D. " Computational Experience with the Parallel Progressive Hedging Algorithm for Stochastic Linear Programs", Proceedings of 1993 Parallel Computing and Transputers Conference, pp 164 - 174, Brisbane, Nov 1993 Abstract pghed.pdf
Rawling, M., Francis, R. and Abramson, D. "Performance Bounds for the Conservative Parallel Discrete Event Simulation of VLSI Circuits and Systems", 15th Australian Computer Science Conference, Hobart, Jan 1992, pp 753 - 767. Abstract perfbounds_vlsi.pdf
Jones, D, Abramson, D.A. and Hulskamp, J. "Porting Parallel Programs from Shared Memory Multiprocessors to Transputer Based Message Passing Systems", 1991 Australian Transputer and OCCAM users group, Canberra, September 1991. Abstract
McKay, A and Abramson, D, "Using SISAL to implement the Abingdon Cross Image Processing Benchmark", 4th Australian SuperComputing Conference, Gold Coast, Dec 1991, pp 107 - 116. Abstract sisal_abingdon.pdf
Abramson, D.A., Dix, M., Whiting, P., "A Study of the Shallow Water Equations on Various Parallel Architectures", 14th Australian Computer Science Conference, pp 06-1 - 06-12, Sydney, 1991 Abstract shallow_water.pdf
Abramson, D.A., et al, "Super Computing Applications in the CSIRO-DIT High Performance Computation Project", 3rd Australian Supercomputing Conference, Melbourne, Dec 1990 Abstract csiro-dit.pdf
Abramson, D.A. and Rosenberg, J. "A Vertical User Interface to Horizontal Microcode via a Retargetable Microassembler", Proceedings of 8th Australian Computer Science Conference, Feb 1985, Melbourne, Australia, pp 8-1 - 8-10. Abstract vertuser_retarget.pdf
Yap, R., Rosenberg, J. and Abramson, D.A. "A C compilerfor a Capability Based Computer", Proceedings of the 9th Australian Computer Sciences Conference, Canberra Jan 1985, pp 23 - 34. Abstract ccomp_capab.pdf
Abramson, D.A. and Rosenberg, J "Supporting a Capability-based Architecture in Silicon", 4th Australian Micro-electronics conference, Sydney, May 1985, pp 43 - 50. Abstract support_cap_silicon.pdf
Abramson, D.A. "A Microcode Emulator for Undergraduate Teaching", Proc. 7th Australian Sciences Conference, Adelaide, Australia, Feb 1984, pp 3-1 - 3-10, . Abstract microem_undergrad.pdf
Abramson, D.A. "The MONADS II Computer System," Proc. 6th Australian Sciences Conference, Sydney, Februrary 1983, pp 1 - 10. Abstract monads2_compsys.pdf
Keedy, J.L., Abramson, D., Rosenberg, J. and Rowe, D.M. "The MONADS Project Stage 2: Hardware Designed to Support Software Engineering Techniques", Proc. 9th Australian Computer Conference, Hobart, August 1982, pp 575 - 580, . Abstract monads3arch.pdf
Keedy, J.L., Abramson D., Rosenberg, J. and Rowe, D.M. "A Comparison of the MONADS II and III Computer Systems", Proc. 9th Australian Computer Conference, Hobart, August 1982, pp 581 - 58 . Abstract monads2vmonads3.pdf
Abramson, D.A. "Hardware for Capability Based Addressing", Proc. 9th Australian Computer Conference, Hobart, pp 101-115, August, 1982. Abstract hard4_capb_add.pdf
Abramson, D.A.,1982, "A Technique for Enhancing Processor Architecture" , Proc. 5th Australian Computer Science Conference", Perth (Australian Computer Science Communications 4, 1, pp. 47-57). Abstract tech4enh_procarch.pdf
Abramson, D.A.,1981, "Hardware Management of a Large Virtual Memory, Proc. 4th Australian Computer Science Conference", Brisbane (Australian Computer Science Communications 3, 1, pp. 1-13). Abstract hardmgt_lge_virtmem.pdf
Book Chapter
Abramson, D. A. (2011) “Applications Development for the Computational Grid”, D.Sc. Thesis, Faculty of Science, Monash University. Abstract DSc.pdf
Bethwaite, B., Abramson, D., Bohnert, F., Garic, S., Enticott, C., Peachey, T., “Mixing the Grid and Clouds: High-throughput Science using the Nimrod Tool Family”, “Cloud Computing: Principles, Systems and Applications”, Eds Antonopoulos and Gillam, Springer, pp 219-237, ISBN: 978-1-84996-240-7, 2010. Abstract From Springer.com 
Buyya, R. and Abramson, D. “The Nimrod/G Grid Resource Broker for Economic-based Scheduling”, in Market-Oriented Grid and Utility Computing (Wiley Series on Parallel and Distributed Computing), Editors Rajkumar Buyya and Kris Bubendorfer, ISBN-13: 978-0470287682, November 2009. Abstract
Peachey, T. C., Abramson D., and Lewis A., 2009, Parallel line search, in Optimization: Structure and Applications, Springer Optimization and Its Applications , Vol. 32, Pearce, C.; Hunt, E.(Eds.), Chapter 20, pp 369 – 381, ISBN: 978-0-387-98095-9 Abstract From Springer.com 
Ho, T and Abramson, T. “An Active Data Model”, in High Performance & Large Scale Computing, W. Gentzsch, L. Grandinetti, G. Joubert (Editors), IOS Press, Amsterdam, The Netherlands, Advances in Parallel Computing, 2009. Abstract
Goscinski, W. and Abramson, D. “An Infrastructure for the Deployment of e-Science Applications”, in “High Performance Computing (HPC) and Grids in Action”, Volume 16 Advances in Parallel Computing, Editor: L. Grandinetti, March 2008, approx. 540 pp., hardcover, ISBN: 978-1-58603-839-7. Abstract ios web site 
Baldridge, K. K., Sudholt, W., Greenberg, J., Amoreira, C., Potier, Y., Altintas, I., Birnbaum, A., Abramson, D. A., Enticott, C. M., Garic, S., 2006, Cluster and grid infrastructure for computational chemistry and biochemistry, in Parallel Computing for Bioinformatics and Computational Biology, eds Albert Y. Zomaya, John Wiley & Sons, NJ USA and Canada, pp. 531-550. Abstract
De Silva, A. and Abramson, D. A. 1996 , "Parallel algorithms for solving Stochastic Linear Programs", Chapter 38, pp 1097 -1115, Handbook of Parallel and Distributed Computing, McGraw Hill, Ed Albert Zomaya, ISBN 0-073020-2, Abstract chapter.pdf
Abramson, D., Cameron, G. "DCompose: A Tool for Measuring Data Decomposition on Distributed Memory Multiprocessors", Current and Future Trends in Parallel and Distributed Computing, Ed Albert Zomaya, Thomson Computer Press, Chapter 15, pp 411 - 433, ISBN 1-85032-188-4, 1995 Abstract dcompose.pdf
Wail, S. and Abramson, D.A, "Can Data-flow Machines be programmed with an Imperative Language?", Appearing in "Advanced Topics in Dataflow Computing", IEEE Computer Society Press, 1995, Editors Gao, Bic and Gaudiot. BP06542, ISBN 0-8186-6542-4, pp 229-266. Abstract
Abramson, D.A. and Egan, G. "Design Considerations for a High Performance Dataflow Multiprocessor", Chapter 4, "Advanced Topics in Dataflow Computing", Prentice Hall, 1991. Abstract highp_dataf_multip.pdf
International Conference
Huynh, M., Jin, C., Bethwaite, B., Abramson, D., Papadopoulos, P. and Clementi, L. “Improved Virtual Machine Cloud Provisioning Cloud Asia, 2013, 14-17th May 2013, Singapore. Abstract CloudAsia2013.pdf
Chao, J., Ding, L. and Abramson, D. “Extending the Eclipse Parallel Tools Platform debugger with Scalable Parallel Debugging Library”, ICCS 2013, Barcelona, Spain, June 5 - 7, 2013. Abstract ICCS2013.pdf 
Chao, J, Abramson, D., Dinh, M., Kurniawan, D., Gontarek, A, Moench, B. and DeRose, L., “A Scalable Parallel Debugging Library with Pluggable Communication Protocols”, CCGrid 2012, The 12th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing, May 13-16, 2012, Ottawa, Canada. Abstract from IEEE Digital Library 
Nguyen, H and Abramson, D. “WorkWays: Interactive Workflow-based Science Gateways”,8th IEEE International Conference on e-Science, October 8-12, 2012, Chicago, IL, USA. Abstract from IEEE Digital Library 
Peachey, T.C., Riley, M. J. W., Abramson, D. and Stewart, J., “A Simplex-like Search Method for Bi-objective Optimization”, EngOpt 2012 - International Conference on Engineering Optimization, Rio de Janeiro, Brazil, 1-5 July 2012. Abstract EngOpt2012.pdf
Killeen, N., Lohrey, J., Farrell, M., Liu, W., Garic, S., Abramson, D. and Nguyen, H. “Integration of modern data management practice with scientific workflows”, 8th IEEE International Conference on e-Science, October 8-12, 2012, Chicago, IL, USA. Abstract from IEEE Digital Library 
Yu, H.L. , Tan, J. and Abramson, D., “Solving Optimization Problems in Nimrod/OK using a Genetic Algorithm”, ICCS 2012, Omaha, Nebraska, June 3-6. Abstract from Science Direct 
Dinh, M., Abramson, D., Chao, J., Kurniawan, D., Gontarek, D., Moench, B. and DeRose, L. "Debugging Scientific Applications With Statistical Assertions", in International Conference on Computational Science (ICCS), Omaha, Nebraska, USA. Abstract from ScienceDirect 
Kipouros, T., Peachey, T., Abramson, D and Savill, M. "Enhancing and Developing the Practical Optimisation Capabilities and Intelligence of Automatic Design Software", 8th AIAA Multidisciplinary Design Optimization Specialist Conference, 23 - 26 April, Honolulu, Hawaii, AIAA-2012-1677. Abstract AIAA-2012-1677-148.pdf
Dinh, M., Abramson, D., Chao, J., Kurniawan, D., Gontarek, A., Moench, B. and DeRose, L. "Scalable parallel debugging with statistical assertions", in 17th ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming (PPoPP) - Poster, New Orleans, LA, USA, pp. 311-312. Abstract from ACM Digital Library 
Dinh, M., Abramson, D., Kurniawan, D., Moench, B. and DeRose, L., “Assertion based parallel debugging”, CCGrid, 2011, Newport Beach, CA, 24-26th May, 2011. Abstract ccgrid2011_final.pdf
Abramson, D., Arzberger, P., Wienhausen, G., Date, S., Lin, F-P., Nan, K. and Shimojo, S., “Cyberinfrastructure Internship and its application to e-Science”, to appear, e-Science 2011, Stockholm, Dec 2011. Abstract PRIMEe-Science2011V2.pdf
S. Smanchat, M. Indrawan, S. Ling, C. Enticott, D. Abramson, "A Scheduler based on Resource Competition for Parameter Sweep Workflow," Proceedings of the International Conference on Computational Science, ICCS, 1-3 June 2011, pp. 176-185. Abstract ScienceDirect 
Nguyen, H and Abramson, D. Bethwaite, B., Dinh, M., Enticott, C., Firth, S., Garic, S., Harper, I., Lackmann, M., Russel, A.B.M, Schek, S. and Vail, M. “Integrating Scientific Workflows and Large Tiled Display Walls: Bridging the Visualization Divide”, Fourth International Workshop on Parallel Programming Models and Systems Software for High-End Computing (P2S2), co-located with 2011 International Conference on Parallel Processing (ICPP-2011), Taipei, Taiwan September 13-16, 2011. Abstract OptiPortal ICPP 2011.pdf
Enticott, C., Peachey, T., Abramson, D., Gavaghan, D., Bond, A., Elton, D., Mashkina, E., Lee, C., Kennedy, G. “Electrochemical Parameter Optimization using Scientific Workflows”, IEEE e-Science 2010, December 6th – 9th, Brisbane, 2010. Abstract 4290a324.pdf
Abramson, D., Dinh, M.N., Kurniawan, D., Moench, B. and DeRose, L. “Data Centric HIghly Parallel Debugging”, 2010 International Symposium on High Performance Distributed Computing (HPDC 2010), Chicago, USA, June 2010 Abstract HPDC2010.pdf
Russel, A.B.M., Abramson, D., Bethwaite, B., Dinh, M., Enticott, C., Firth, S., Garic, S., Harper, I., Lackmann, M., Schek, S. and Vail, M.: "An Abstract Virtual Instrument System for High Throughput Automatic Microscopy", Procedia Computer Science, Volume 1, Issue 1, ICCS (International Conference on Computational Science) 2010, May 2010, Pages 545-554, ISSN 1877-0509, DOI: 10.1016/j.procs.2010.04.058. Abstract ICCS2010-RusselAbramsonBDEFGHLSV.pdf
Sher, A., Cooling, M., Bethwaite, B., Tan, J., Peachey, T., Enticott, C., Garic, S., Gavaghan, D., Noble, D., Abramson, A., and Crampin, E. “A Global Sensitivity Tool For Cardiac Cell Model: Ionic Currents Balance and Hypertrophic IP3 Transients in Atrial and Ventricular Cell Models”, 32nd Annual International IEEE EMBS Conference of the IEEE Engineering in Medicine and Biology Society in Buenos Aires Sheraton Hotel, Buenos Aires, Argentina during August 31 - September 4, 2010. Abstract GlobalSensitivityToolforCardiacModelling.pdf
Riley, M. J. W., Peachey, T., Abramson D., and Jenkins, K. W., 2010, "Multi-objective engineering shape optimization using differential evolution interfaced to the Nimrod/O tool", IOP Conference Series: Materials Science and Engineering, Volume 10, Article Number 012189. Abstract From IOP Science 
Sher, A., Wang, K., Wathen, A., Abramson, D. and Gavaghan., D. “A Local Sensitivity Analysis Method for Developing Cardiac Models with Identifiable Parameters: Application to L-type Calcium Channels Regulation”, IEEE e-Science 2010, December 6th – 9th, Brisbane, 2010. Abstract 4290a176.pdf
Nunez, S., Bethwaite, B., Brenes, J., Barrantesz, G., Castro, J., Malavassiz, E. and Abramson, D. “NG-TEPHRA: A Massively Parallel, Nimrod/G-enabled Volcanic Simulation in the Grid and the Cloud”, IEEE e-Science 2010, December 6th – 9th, Brisbane, 2010. Abstract 4290a129.pdf
Tan, J., Abramson, D. and Enticott, C. “Firewall Traversal in the Grid Architecture”, 12th IEEE International Conference on High Performance Computing and Communications (HPCC-2010), Melbourne, Australia, September 1-3, 2010. Abstract 05581337.pdf
Pettit, C., Russel, A.B.M., Michael, A., Aurambout, J-P., Sharma, S., Williams S., Hunter, D Chan, P.C., Borda, A., Bishop, I., Abramson, D., “Realising an eScience platform to support climate change adaptation in Victoria, IEEE e-Science 2010, December 6th – 9th, Brisbane, 2010. Abstract 4290a073.pdf
Abramson, D, Bethwaite, B, Dinh, M, Enticott, C, Firth, S, Garic, S, Harper, I, Lackmann, M, Nguyen, H, Ramdas, T, Russel, A.B.M, Schek, S and Vail, M., ”Virtual Microscopy and Analysis using Scientific Workflows”, IEEE e-Science 2009, Dec 9 – 11th, Oxford, UK. Abstract microscopyeSci09.pdf
Abramson D., Bethwaite B., Enticott C., Garic S., Peachey T., "Parameter Space Exploration using Scientific Workflows", ICCS 2009, Baton Rouge, Louisiana, May 2009 Abstract Nimrod-K ICCS09.pdf
Bernabeu, M. O., Corrias, A, Pitt-Francis, J, Rodriguez, B, Bethwaite, B, Enticott, C, Garic, S, Peachey, T, Tan, J, Abramson, D, and Gavaghan, D B. “Grid computing simulations of ion channel block effects on the ECG using 3D anatomically-based models”, Computers and Cardiology, Park City, Utah, September 13-16, 2009. Abstract CinC2009_Bernabeu.pdf
Schmidberger, J., Bethwaite, B., Enticott, C., Bate, M., Androulakis, S., Faux, N., Reboul, C., Phan, J., Whisstock, J., Garic, S., Goscinski, W., Abramson, D., and Buckle, A., 2009, "High-throughput Protein Structure Determination Using Grid Computing", IEEE Workshop on High Performance Computational Biology , May 25, 2009, Rome, Italy, co-located with IPDPS 2009. Abstract HICOMB_Schmidberger_etal.pdf
Smanchat, S., Indrawan, M., Ling S., Enticott, C. and Abramson, D. "Scheduling Multiple Parameter Sweep Workflow Instances on the Grid" IEEE e-Science 2009, Dec 9 - 11th, Oxford, UK. Abstract Scheduling_Grid.pdf
Abramson, D., Bethwaite, B., Enticott, C., Garic, S., Peachey, T., Michailova, A., Amirriazi, S., Chitters, R., "Robust Workflows for Science and Engineering". 2nd Workshop on Many-Task Computing on Grids and Supercomputers(MTAGS 2009), Portland, USA, 16 November 2009 Abstract MTAGS 2009 V4.pdf
Tan, J., Abramson, D. and Enticott, C. “A Virtual Connectivity Layer for Grids”, IEEE e-Science 2009, Dec 9 – 11th, Oxford, UK. Abstract PID1029289.pdf
Kurniawan, D and Abramson, D. “An IDE Framework for Grid Application Development”, Grid 2008, Sept 29th – Oct 1st, Tsukuba, Japan. Abstract Grid08_Donny.pdf
Ramdas, T., Egan, G. K., Abramson, D., & Baldridge, K. K. (2008). 'Run-time thread sorting to expose data-level parallelism'. In Proceedings of the International Conference on Application-Specific Systems, Architectures and Processors. (pp. 55-60). Abstract
Sher, A., Abramson, D, Enticott, C, Garic, S, Gavaghan, D., Noble, D., Noble, P., Peachey, T. “Incorporating local Ca2+ dynamics into single cell ventricular models using Nimrod/O”, ICCS 2008, Krakow, Poland, June 2008. Abstract iccs2008.pdf
Abramson, D. A., Enticott, C., Peachey,T., "Parameter Estimation using Scientific workflows", Poster for Fourth IEEE International Conference on eScience, Indianopolis, 7-12 December 2008 Abstract eSciposter_CME.pdf
Abramson D, Enticott C, Altintas I., "Nimrod/K: Towards Massively Parallel Dynamic Grid Workflows", IEEE SuperComputing 2008, Austin, Texas November 2008 Abstract SC08 - NimrodK.pdf
Bethwaite, B., Abramson, D., Buckle, A., Grid Interoperability: An Experiment in Bridging Grid Islands, PRAGMA Workshop at e-Science, 2008, 4th IEEE International Conference on e-Science, Indiana, Dec 8th – 12th, 2008 Abstract GridInterop.pdf
Amirriazi S., Chang S., Peachey T., Abramson D. and Michailova A., Optimizing Cardiac Excitation-Metabolic Model By Using Parallel Grid Computing, Biophysics 2008, Long Beach, California, February 2008. Abstract Michailova08.ppt
Chan, P. and Abramson, D. “A Scalable and Efficient Prefix-Based Lookup Mechanism for Large-Scale Grids”, The 3rd IEEE International Conference on e-Science and Grid Computing, Bangalore, India, 10-13 December 2007 Abstract prefix_lookup.pdf
Kurniawan, D. and Abramson, D. “A WSRF-Compliant Debugger for Grid Applications”, 21st IEEE International Parallel & Distributed Processing Symposium (IPDPS 2007) March 26-30, 2007, Long Beach, California USA Abstract IPDPS2007.pdf
Ayyub, S., Abramson, D. A., 2007, GridRod - A dynamic runtime scheduler for grid workflows, Proceedings of the 2007 International Conference on Supercomputing, 17 June 2007 to 21 June 2007, The Association for Computing Machinery, New York NY USA, pp. 43-52. Abstract 84-ayyub.pdf
Chan, P. and Abramson, D., “Persistence and Communication State Transfer in an Asynchronous Pipe Mechanism”, The 13th International Conference on Parallel and Distributed Systems (ICPADS 07), Hsinchu, Taiwan, December 5-7, 2007. Abstract icpads2007.pdf
Chan, P. and Abramson, D. “pi-spaces: Support for Decoupled Communication in Wide-Area Parallel Applications”, 6th International Conference on Grid and Cooperative Computing (GCC2007), Urumchi, Xinjiang, China, August 16-18, 2007 Abstract pi-spaces.pdf
Ramdas, T., Abramson, D., Egan, G. & Baldridge, K. “Converting massive TLP to DLP: a special-purpose processor for molecular orbital computations”, ACM International Conference on Computing Frontiers 2007, pp. 267-276, Ischia Italy, May 7 – 9 2007 Abstract ramdas_CF07.pdf
Ho, T. and Abramson, D., “Active Data: Supporting the Grid Data Life Cycle”, ”, 7th IEEE International Symposium on Cluster Computing and the Grid, CCGrid, Brazil 2007, pp 39 – 46, Abstract ho-activedata.pdf
Kurniawan, D., Abramson, D. A., An integrated grid development environment in Eclipse, Proceedings of the Third IEEE International Conference on e-Science and Grid Computing, 10 December 2007 to 13 December 2007, IEEE Computer Society, Los Alamitos CA USA, pp. 491-498 Abstract eScience2007Donny.pdf
Faux N., Beitz A., Bate M., Amin A. A., Atkinson I., Enticott C., Mahmood K., Swift M., Treloar A., Abramson D., Whisstock J. C., and Buckle A. M., “eResearch Solutions for High Throughput Structural Biology”, The 3rd IEEE International Conference on e-Science and Grid Computing, Bangalore, India, 10-13 December 2007, CS Press, pp 221-227. Abstract buckle-protein.pdf
Ayyub, S., Abramson, D., Enticott, C., Garic, S., Tan, J. “Executing Large Parameter Sweep Applications on a Multi-VO Testbed”, 7th IEEE International Symposium on Cluster Computing and the Grid, CCGrid 2007, Los Alamitos CA USA, pp 73 – 80 Abstract shahaan-PSA.pdf
Abramson D., Peachey T. and Lewis A. “Model Optimization and Parameter Estimation with Nimrod/O”, The International Conference on Computational Science, May 28-31, 2006, University of Reading, UK Abstract iccs06.pdf
Pillai, B., Premaratne, M., Abramson, D., Nirmalathas, A. and Lim, C., “Pulse Propagation in Polarization-sensitive Semiconductor Optical Amplifiers”, Joint International Conferences on Optical Internet and Next Generation Network (COIN-NGNCON 2006), which Korea, July 9 - 13, 2006. Abstract
Abramson, D. “Applications Development for the Computational Grid”, The Eighth Asia Pacific Web Conference, Harbin, China, Invited Key Note Address, 16th – 18th Jan, 2006. Lecture Notes in Computer Science, Volume 3841 / 2006, pp. 1 – 12, ISSN: 0302-9743 Abstract APWeb.pdf
Abramson, D., Lynch, A., Takemiya, H., Tanimura, Y., Date, S., Nakamura, H., Jeong, K., Zhu, J., Lu, Z., Lee, H., Wang, C., Shih, H., Molina, T., Baldridge, K., Li, W. and Arzberger, P. “Deploying Scientific Applications to the PRAGMA Grid Testbed: Strategies and Lessons”, 6th IEEE International Symposium on Cluster Computing and the Grid 16-19 May 2006, Singapore. Abstract PRAGMAApps.pdf
Zheng, C., Abramson, D., Arzberger, P., Ayyub, S., Enticott, C., Garic, S., Katz, M., Kwak, J., Lee, B. S., Papadopoulos, P., Phatanapherom, S., Sriprayoonsakul, S., Tanaka, Y., Tanimura, Y., Tatebe, O., Uthayopas, P. “The PRAGMA Testbed: Building a Multi-Application International Grid”, Workshop on Grid Testbeds, 6th IEEE International Symposium on Cluster Computing and the Grid 16-19 May 2006, Singapore Abstract PRAGMATestbed.pdf
Ho, T. and Abramson, D. “A Unified Data Grid Replication Framework”, 2nd IEEE International Conference on e-Science and Grid Computing. Dec. 4- 6, 2006, Amsterdam, Netherlands Abstract eScience2006Ho.pdf
Lee, B., Tang, M., Zhang, J., Soon, O. Y., Zheng, C., Arzberger, P., Abramson, D. “Analysis of Jobs in a Multi-Organizational Grid Test-bed”, 6th IEEE International Symposium on Cluster Computing and the Grid 16-19 May 2006, Singapore Abstract PRAGMAMogas.pdf
Goscinski, W. and Abramson, D. “Motor: A Virtual Machine for High Performance Computing”, IEEE HPDC 06, Paris 2006 Abstract Motor.pdf
Abramson, D. A., Amoreira, C., Baldridge, K. K., Berstis, L., Kondrick, C., Peachey, T. C., 2006, A flexible grid framework for automatic protein-ligand docking, Proceedings of the Second IEEE International Conference on e-Science and Grid Computing, Dec. 4- 6, 2006, IEEE Computer Society, Los Alamitos USA, pp. 1-8 Abstract eScience2006Docking.pdf
Kommineni, J., Abramson, D. and Tan, J. “Communication over a Secured Heterogeneous Grid with the GriddLeS runtime environment”, 2nd IEEE International Conference on e-Science and Grid Computing. Dec. 4- 6, 2006, Amsterdam, Netherlands. Abstract eScience2006Jagan.pdf
Kommineni, J and Abramson, D. “Building Virtual Applications for the GRID with Legacy Components”, in “Advances in Grid Computing - EGC 2005, European Grid Conference”, Springer Lecture Notes in Computer Science (LNCS 3470), Amsterdam, The Netherlands, February 14-16, 2005. pp 961 – 971. Edited by P.M.A. Sloot, A.G. Hoekstra, T. Priol, A. Reinefeld, M. Bubak. Abstract
Tan, J, Abramson, D. and Enticott, C. “Bridging Organizational Network Boundaries on the Grid”, IEEE Grid 2005, Seattle, Nov 2005 Abstract Grid2005.pdf
Tran, N, Abramson, D., Mingins, C., “Call-Ordering Constraints”, 12th ASIA-PACIFIC Software Engineering Conference (APSEC 2005), Taipei , Taiwan, December 15-17, 2005 Abstract tran-callordering.pdf
Goscinski, W and Abramson, D. “Legacy Application Deployment over Heterogeneous Grids using Distributed Ant”, IEEE Conference on e-Science and Grid Computing, Melbourne, Dec 2005 Abstract DistAnt2.pdf
Abramson, D., Kommineni, J. and Altinas, I. “Flexible IO services in the Kepler Grid Workflow Tool”, IEEE Conference on e-Science and Grid Computing, Melbourne, Dec 2005. Abstract Kepler IEEE eScience.pdf
Chan, P. and Abramson, D. “Netfiles: An Enhanced Stream-based Communication Mechanism”, International Symposium on High Performance Computing (ISHPC), Higashikasugano, Nara City, Japan, Sept 7th – 9th, 2005 Abstract netfiles2005.pdf
Ho, T. and Abramson, D. “The GriddLeS Data Replication Service”, IEEE Conference on e-Science and Grid Computing, Melbourne, Dec 2005. Abstract GriddLeSReplication.pdf
Goscinski, W. and Abramson, D. “Distributed Ant: A System to Support Application Deployment in the Grid”, IEEE Grid 2004, November, 2004, Pittsburgh, PA Abstract GoscinskiW_DistributedAnt.pdf
Lewis, A., Abramson, D. and Peachey, T. “RSCS: A Parallel Simplex Algorithm for the Nimrod/O Optimization Toolset”, International Symposium on Parallel and Distributed Computing, In association with HeteroPar’04, July 5th – 8th 2004, University College Cork, Ireland. Abstract ispdc04.pdf
Nam, T., Abramson, D. and Mingins, C. “A Taxonomy of Call Ordering Problems”, APSEC2004, Nov. 30 -Dec. 3, 2004, Busan, Korea Abstract
Abramson, D. and Kommineni, J., “A Flexible IO Scheme for Grid Workflows”. IPDPS-04, Santa Fe, New Mexico, April 2004 Abstract FM.pdf
Abramson, D., Dongarra, J., Meek, E., Roe, P and Shi, Z., “Simplified Grid Computing through Spreadsheets and NetSolve”, Omiya Sonic City, Saitama, Tokyo, Japan, July 20-22, 2004, HPC Asia 2004 Abstract HPC Asia 2004.pdf
Abramson, D., Barak, A and Enticott, C. “Job Management in Grids of MOSIX Clusters”, 16th International Conference on Parallel and Distributed Computing Systems, pp 36 – 42, August 13 - 15, 2003 Reno, Nevada, USA Abstract MosixPDCS03.pdf
Lewis, A. and Abramson, D. “An Evolutionary Programming Algorithm for Multi-Objective Optimisation”, Proc. 2003 Congress on Evolutionary Computation (CEC 2003), vol. 3, pp. 1926-1932, Canberra, Dec. 2003 Abstract moepsoc.pdf
Tran, N., Mingins, C., and Abramson, D., “Managed Assertions for Component Contracts', Proceedings of the Seventh World Conference on Integrated Design and Process Technology (IDPT-2003), 3-5 December 2003, Austin, Texas Abstract ipdt2003.pdf
Lewis, A., Abramson, D. and Peachey, T. “An Evolutionary Programming Algorithm for Automatic Engineering Design, PPAM 2003, Fifth International Conference on Parallel Processing and Applied Mathematics, Czestochowa, Poland, Lecture Notes in Computer Science, Volume 3019 / 2004, pp. 586 - 594, ISBN: 3-540-21946-3, September 7-10, 2003 Abstract Epsoc.pdf
Buyya, R, Date, S., Mizuno-Matsumoto, Y., Venugopal, S and Abramson, D. “Composition of Distributed Brain Activity Analysis and its On-Demand Deployment on Global Grids, New Frontiers in High-Performance Computing: Proceedings of the 10th International Conference on High Performance Computing (HiPC 2003) Workshops (Dec. 17, 2003, Hyderabad, India), ISBN: 81-88901-05-9, Elite Publishing House, New Delhi, India Abstract neurogrid-escience.pdf
Searle, A, Gough, J. K. and Abramson, D. A. “DUCT: An Interactive Define-Use Chain Navigation Tool for Relative Debugging”, AADebug’03. Ghent, Belgium, September 2003 Abstract AADebug03.pdf
Abramson, D., Finkel, R., Kurniawan, D., Kowalenko, V. and Watson, G. “Parallel Relative Debugging with Dynamic Data Structures”, 16th International Conference on Parallel and Distributed Computing Systems, pp 22 – 29, August 13 - 15, 2003 Reno, Nevada, USA Abstract GuardPDCS03.pdf
Peachey, T., Abramson, D., Lewis, A., Kurniawan, D. and Jones, R. “Optimization using Nimrod/O and its Application to Robust Mechanical Design”, PPAM 2003, Fifth International Conference on Parallel Processing and Applied Mathematics, Czestochowa, Poland, Lecture Notes in Computer Science, Volume 3019 / 2004, pp. 730 – 737, ISBN: 3-540-21946-3, September 7-10, 2003 Abstract Fatigue.pdf
Buyya, R, Murshed, M., and Abramson, D. “A Deadline and Budget Constrained Cost-Time Optimization Algorithm for Scheduling Task Farming Applications on Global Grids”, The 2002 International Conference on Parallel and Distributed Processing Techniques and Applications, Las Vegas, Nevada, USA, June 2002 Abstract pdpta02.pdf
Abramson, D., Watson, G. and Dung, L. “Guard: A Tool for Migrating Scientific Applications to the .NET Framework”, 2002 International Conference on Computational Science (ICCS 2002), Amsterdam, The Netherlands, April 21st 2002, pp 834 - 843 Abstract ICCS2002.pdf
Gedge, R. and Abramson, D. “The Virtual Tea Room - experiences with a new type of social space”, to appear, 7th International Workshop on Groupware, 6-8 September 2001, Darmstadt, Germany Abstract vtr.pdf
Abramson, D, Lewis, A. and Peachy, T. “Case Studies in Automatic Design Optimisation using the P-BFGS Algorithm”, 2001 High Performance Computing Symposium (HPC'01), Advanced Simulation Technologies Conference, April 22-26, 2001, pp 104 – 109, Seattle, Washington (USA). Abstract CaseStudies.pdf
Chan, P. and Abramson, D. “NetFiles: A Novel Approach to Parallel Programming of Master/Worker Applications”, HPC Asia 2001, 24-28 September 2001 • Royal Pines Resort Gold Coast, Queensland, Australia Abstract netfiles.pdf
Watson, G., Abramson, D. “Parallel Relative Debugging for Distributed Memory Applications: A Case Study”, International Conference on Parallel and Distributed Processing Techniques and Applications June 25-28, 2001, Las Vegas, Nevada, USA Abstract pdpta2001.pdf
Buyya, R., Stockinger, H., Giddy, J. and Abramson, D. “Economic Models for Management of Resources in Peer-to-Peer and Grid Computing”, Technical Track on Commercial Applications for High-Performance Computing, SPIE International Symposium on The Convergence of Information Technologies and Communications (ITCom 2001), August 20-24, 2001, Denver, Colorado, USA Abstract economicmodels.pdf
Buyya, R, Abramson, D., and Giddy, J., “A Case for Economy Grid Architecture for Service Oriented Grid Computing”, 10th Heterogeneous Computing Workshop April 23, 2001 in conjunction with IPDPS in San Francisco, California Abstract ecogrid.pdf
Abramson, D., Roe, P., Kotler L and Mather, D., “ActiveSheets: Super-Computing with Spreadsheets”. 2001 High Performance Computing Symposium (HPC'01), Advanced Simulation Technologies Conference, April 22-26, 2001, pp 110 – 115, Seattle, Washington (USA). Abstract ActiveSheets.pdf
Abramson D, Lewis A, Peachey T, Fletcher, C., “An Automatic Design Optimization Tool and its Application to Computational Fluid Dynamics”, SuperComputing 2001, Denver, Nov 2001. Abstract SC2001.pdf
Lewis, A., Saario, S., Abramson, D. and Lu, J., “An Application of Optimisation for Passive RF Component Design”, Conference on Electromagnetic Field Computation, Milwaukee, June 4-7th 2000 Abstract cefc00_opt.pdf
Buyya, R., Giddy, J. and Abramson, D. “An Evaluation of Economy-based Resource Trading and Scheduling on Computational Power Grids for Parameter Sweep Applications”, Workshop on Active Middleware Services (AMS 2000), (in conjuction with Ninth IEEE International Symposium on High Performance Distributed Computing), Kluwer Academic Press, August 1, 2000, Pittsburgh, USA Abstract ams2000.pdf
Buyya, R., Abramson, D. and Giddy, J. “Nimrod/G: An Architecture of a Resource Management and Scheduling System in a Global Computational Grid”, HPC Asia 2000, May 14-17, 2000, pp 283 – 289, Beijing, China Abstract hpcasia.pdf
Watson, G. and Abramson, D. “The Architecture of a Parallel Relative Debugger”, 13th International Conference on Parallel and Distributed Computing Systems - PDCS 2000, August 8 - 10, 2000 Abstract pdcs00.pdf
Buyya, R, Abramson, D., and Giddy, J., “An Economy Driven Resource Management Architecture for Global Computational Power Grids”, International Conference on Parallel and Distributed Processing Techniques and Applications (PDPTA), Las Vegas, Nevada, USA, June 26 - 29, 2000 Abstract GridEconomy.pdf
Abramson, D., Giddy, J. and Kotler, L. “High Performance Parametric Modeling with Nimrod/G: Killer Application for the Global Grid?”, International Parallel and Distributed Processing Symposium (IPDPS), pp 520- 528, Cancun, Mexico, May 2000 Abstract ipdps.pdf
Abramson, D, Lewis, A. and Peachy, T., “Nimrod/O: A Tool for Automatic Design Optimization”, The 4th International Conference on Algorithms & Architectures for Parallel Processing (ICA3PP 2000), Hong Kong, 11 - 13 December 2000 Abstract nimrodo.pdf
Giles, S. and Abramson, D. “The Virtual Tea Room: Integrating Video into Everyday Life”, International Wireless and Telecommunications Symposium, Malaysia, 17-21st May, 1999 Abstract iwts99.pdf
Smith, K. A, Abramson, D. and Duke, D., “Efficient Timetabling Formulations for Hopfield Neural Networks”, Artificial Neural Networks in Engineering Conference, 1999 (ANNIE’99). Abstract effic_tt_hopfield.pdf
Abramson, D., Power, K., and Sosic, R., “Simulating Computer Networks using Clusters of PCs”, HPC-TelePar'99 at the 1999 Advanced Simulation Technologies Conference (ASTC'99), April 11-15, 1999, San Diego, California,USA Abstract astc.pdf
Postula, A., Abramson, D., Ziping Fang and Logothetis, P “A Comparison of High Level Synthesis and Register Transfer Level Design Techniques for Custom Computing Machines”, Configware Minitrack in the Software Technology Track of the Thirty-First Hawaii International Conference on System Sciences (HICSS-31), Hawaii, Jan 1998. Abstract hls.pdf
Abramson, D, Logothetis, P., Randall, M and Postula, A. “A Tail of 2n cities: Performing Combinatorial Optimisation using Linked Lists on Special Purpose Computers”, The International Conference on Computational Intelligence and Multimedia Applications - 1998 (ICCIMA'98), Gippsland, Victoria, Australia, 9-11 February 1998, pp 17 – 26. Abstract iccima.pdf
Postula, A., Chen, S., Jozwiak, L and Abramson, D. “Automated Synthesis of Interleaved Memory Systems for Custom Computing Machines”, Workshop on "Digital System Design: Architectures, Methods and Tools", 24th Euromicro Conference, Västerås, Sweden, August 25th-27th, 1998 Abstract autosynth_interleaved_ms.pdf
Abramson, D., Smith, K., Logothetis, P. and Duke, D “FPGA Based Implementation of a Hopfield Neural Network for Solving Constraint Satisfaction Problems”, Workshop on Computational Intelligence of the 24th Euromicro Conference, Västerås, Sweden, August 25th-27th, 1998 Abstract Neural.pdf
Abramson, D. Logothetis, P, Postula, A., Randall, M, “FPGA Based Custom Computing Machines for Irregular Problems", Fourth International Symposium on High-Performance Computer Architecture, (HPCA98), February 1-4, 1998, Las Vegas, Nevada Abstract ccm.pdf
Lewis, A, Abramson, D and Simpson, R., “Parallel non-linear optimization : Towards the design of a decision support system for air quality management”, IEEE Supercomputing 97, San Jose, 1997. Abstract SC97_final.pdf
Abramson, D.A., Sosic, R. and Watson, G. "Implementation Techniques for a Parallel Relative Debugger ", International Conference on Parallel Architectures and Compilation Techniques - PACT '96, October 20-23, 1996, Boston, Massachusetts, USA Abstract pact.pdf
Postula, A., Abramson, D. and Logothetis, P, "Synthesis for Prototyping of Application Specific Processors", Invited Key Note Talk, 3rd Asia Pacific Conference on HDL (APCHDL-96), Jan 8-10, 1996, Bangalore, India. Abstract synthesis.pdf
Postula, A., Abramson, D. and Logothetis, P, "The Design of a Specialised Processor for the Simulation of Sintering", Proceedings of the 22nd Euromicro Conference, September 2-5, 1996, Prague, Czech Republic. Abstract sinter.pdf
Abramson D., Foster, I., Michalakes, J. and Sosic R., "Relative Debugging and its Application to the Development of Large Numerical Models", Proceedings of IEEE Supercomputing 1995, San Diego, December 95. Selected as best paper Abstract sc95.pdf
Abramson, D.A. and Sosic, R. "A Debugging Tool for Software Evolution", CASE-95, 7th International Workshop on Computer-Aided Software Engineering, Toronto, Ontario, Canada, July 1995, pp 206 - 214. Also appeared in proceedings of 2nd Working Conference on Reverse Engineering, Toronto, Ontario, Canada, July 1995 Abstract case95.pdf
Abramson, D.A. and Sosic, R. "Relative Debugging using Multiple Program Versions", Key Note Address, 8th Int. Symp. on Languages for Intensional Programming , Sydney, 3-5th May, 1995. In Intensional Programming I, World Scientific, ISBN 981 - 02 - 2400 - 1. Abstract islip.pdf
Abramson D., Sosic R., Giddy J. and Hall B., "Nimrod: A Tool for Performing Parametised Simulations using Distributed Workstations", The 4th IEEE Symposium on High Performance Distributed Computing, Virginia, August 1995, pp 112-121 Abstract nimrod.pdf
Abramson, D.A., Cope, M. and McKenzie, R. "Modelling Photochemical Pollution using Parallel and Distributed Computing Platforms", Proceedings of PARLE-94, pp 478 - 489, Athens, Greece, July 1994. Abstract smog.pdf
Abramson, D. "Predicting the Performance of Scientific Applications on Distributed Memory Multiprocessors" The IEEE 1994 Scalable High Performance Computing Conference. Knoxville Tennessee, pp 285 - 292, May 23-25 1994. Abstract shpcc.pdf
Jones, D., Hulskamp, J. and Abramson, D. "Tools to facilitate the implementation of grid based finite difference algorithms on distributed computer systems", Proceedings of World Transputer Conference, Aachen, 20-22 September, Germany, 1993 Abstract tools4_fin_diff_algo.pdf
Abramson, D., Cameron, G., Dix, M. and Makies, M. "STORM: A Bus Based Shared Memory Multiprocessor for Climate Modelling", Proceedings of 26th Hawaii International Conference on System Sciences, Kauai, Hawaii, pp 96 - 105, Jan 1993. Abstract storm.pdf
Abramson, D. A. "High Performance Application Specific Architectures", Proceedings of 26th Hawaii International Conference on System Sciences, Kauai, Hawaii, pp 92 - 95, Jan 1993 Abstract hpapps4_spec_arch.pdf
Abramson, D. A. and Abela, J. "A Parallel Genetic Algorithm for Solving the School Timetabling Problem", IJCAI workshop on Parallel Processing in AI, Sydney, August 91. Also appearing in 15 Australian Computer Science Conference, Hobart, Feb 1992, pp 1 - 11. Abstract pga.pdf
Rawling, M., Francis, R. and Abramson, D. "Potential Performance of Parallel Conservative Simulation of VLSI Circuits and Systems", IEEE/ACM 25th Annual Simulation Symposium, pp 71 - 80. 1992. Abstract potential_vlsi.pdf
Francis, R., Abramson, D., Dix, M. and Rotstayn, L. "SIMD Climate Modeling", Parallel Computing 91, pp 471 - 482, London, September 1991. Abstract simd_clim_model.pdf
Abramson, D., Francis, R. and Dix, M. "A Retargettable Programming Environment for Studying Climate Models, Computational Techniques and Applications (CTAC-91), pp 91 - 100, July 1991. Abstract retarget_envt_4climate.pdf
Abramson, D.A. and Freidin, J. "A Parallel Router for Printed Circuit Boards", 24th Hawaii International Conference on System Sciences, pp 164 - 171, Jan 1991. Abstract parall_router_4circbds.pdf
Abramson, D.A. "Case Studies in Parallel Processing", Proceedings of 1989 International Conference on Computation, Applications and Techniques (CTAC 89) Brisbane, 1989, Hemisphere Publishing. Abstract casestud_pll_prog.pdf
Abramson, D. A. "Using a dataflow computer for functional logic simulation", Third International Conference on Supercomputing, Boston, Massachusetts, May 15-20, 1988. Abstract functlogicsimul.pdf
Abramson, D. and Rosenberg, J. "The Micro-Architecture of a Capability Based Computer", Proceedings of ACM 19th International Conference on Microprogramming, New York, 1986. Abstract microarch_capbcomp.pdf
Abramson, D. and Rosenberg, J. "Tools for Microcode development in a Capability based computer", Proceedings of ACM 19th International Conference on Microprogramming, New York, 1986. Abstract microdev4_capbp.pdf
Rosenberg, J. and Abramson, D.A. "The MONADS Architecture: Motivation and Implementation", Proceedings of First Pan Pacific Computer Conference, Melbourne, 1985. Invited Paper. Abstract monadsarch_motimp.pdf
Rosenberg J and Abramson D.A.. (1985) "MONADS PC - A Capability-Based Workstation to Support Software Engineering", Proceedings of Eighteenth Annual Hawaii International Conference on System Sciences, January 2-4, 1985. (Selected as Best paper in Hardware track) Abstract monads_sesupport.pdf
Abramson, D.A. and Keedy, J.L (1985) "Implementing a Large Virtual Memory in a Distributed Computer System", Proceedings of Eighteenth Annual Hawaii International Conference on System Sciences, January 2-4, 1985. Abstract implementing_largevm.pdf
Journal Article
Dinh, M., Abramson, D., Chao, J., Gontarek, A., Moench, B. and DeRose, L., “A data-centric framework for debugging highly parallel applications”, Software: Practice and Experience, Nov 2013. Abstract From Wiley 
Lo, Y.H., Peachey, T., Abramson, D., and Michailova, A. “Sensitivity of rabbit ventricular action potential and Ca2+ dynamics to small variations in membrane currents and ion diffusion coefficients”, BioMed Research International, Volume 2013, Article ID 565431. Abstract from Hindawi 
Mashkina, E., Peachey, T., Lee, CY., Bond, A., Kennedy, G., Enticott, C., Abramson, D. and Elton, D., “Estimation of electrode kinetic and uncompensated resistance parameters 3 and insights into their significance using Fourier transformed ac voltammetry and e-science software tools”, Journal of Electroanalytical Chemistry 690 (2013) 104–110. Abstract from Elsevier 
Pettit, C.J., Williams, S., Bishop, I.D., Aurambout, J., Russel, A.B.M., Michael, A., Sharma, S., Hunter, D., Chan, P., Enticott, C.M., Borda, A., Abramson, D.A., 2013, “Building an ecoinformatics platform to support climate change adaptation in Victoria”, Future Generation Computer Systems, vol 29, issue 2, Elsevier Science, Amsterdam Netherlands, pp. 624-640. Abstract From Elsevier 
Dinh, M., Abramson, D., Chao, J., “Scalable relative debugging”, IEEE Transactions on Parallel and Distributed Systems, Volume 25, issue 3, 740-74, March 2013. Abstract From IEEE 
Smanchat, S., Indrawan, M., Ling, S., Enticott, C. and Abramson, D. “Scheduling Parameter Sweep Workflow in the Grid Based on Resource Competition”, Future Generation Computer Systems 29 (2013) 1164–1183 Abstract From Elsevier 
Sher, A.A., Wang, K., Wathen, A., Maybank, P., Mirams, G., Abramson, D.A., Noble, D., Gavaghan, D.J., 2013, “A local sensitivity analysis method for developing biological models with identifiable parameters: Application to cardiac ionic channel modeling”, Future Generation Computer Systems [P], vol 29, issue 2, Elsevier Science, Amsterdam Netherlands, pp. 591-598. Abstract From Elsevier 
Płóciennik, M, Bartek, T., Owsiak, O., Altintas, I., Wang, J., Crawl, D., Abramson, D., Imbeaux, F., Guillerminet, B., Frauel, Y., Lopez-Caniego, M., Plasencia, I., Pych, W., Ciecielag, P., “Approaches to Distributed Execution of Scientific Workflows in Kepler”, Fundamenta Informaticae, IOS Press, Volume 128, Number 3 / 2013, pp 281-302. Abstract from IOS 
Chambers, J., Bethwaite, B., Diamond, N., Peachey, T., Abramson, D., Petrou, S. and Thomas, E. "Parametric computation predicts a multiplicative interaction between synaptic strength parameters that controls properties of gamma oscillations", Frontiers in Computational Neuroscience, Volume 6, Article 53, doi: 10.3389/fncom.2012.00053, July 2012. Abstract from Frontiers 
Kurniawan, D. and Abramson, D. “ISENGARD: an Infrastructure for Supporting e-Science and Grid Application Development”, Concurrency and Computation Practice and Experience, Volume 23, Issue 4, pp 390–414, 25 March 2011. Abstract isengard2011.pdf
Spencer, D., Zimmerman, A. and Abramson, D. “Project Management in E-Science: Challenges and Opportunities”, Computer Supported Cooperative Work (CSCW), DOI: 10.1007/s10606-011-9140-4, June 2011, Springer Abstract eSciProjMgt.pdf
Spencer, D., Zimmerman, A. and Abramson, D. “Project Management in E-Science: Challenges and Opportunities”, Computer Supported Cooperative Work (CSCW), DOI: 10.1007/s10606-011-9140-4, June 2011, Springer Abstract eSciProjMgt.pdf
Abramson, D., Bethwaite, B., Enticott, C., Garic, S. and Peachey, T. “Parameter Exploration in Science and Engineering using Many-Task Computing”, Special issue of IEEE Transactions on Parallel and Distributed Systems on Many-Task Computing, June 2011, Volume: 22 Issue: 6, 960 – 973. Abstract manytaskcomp.pdf
Peachey, T., Mashkina, E., Lee, C., Enticott, C., Abramson, D., Bond, A., Elton, D., Gavaghan, D., Stevenson, G., Kennedy, G., “Leveraging e-Science Infrastructure for Electrochemistry Research”, Phil. Trans. R. Soc. A, AHM 2011, 10.1098/rsta.2011.0146, Phil. Trans. R. Soc. A, 28 August 2011 vol. 369 no. 1949 pp 3336-3352. Abstract electrochem2011.pdf
Abramson, D., Bernabeu, M., Bethwaite, B., Burrage, K., Corrias, A., Enticott, C., Garic, S., Gavaghan, D., Peachey, T., Pitt-Francis, J., Pueyo, E., Rodriguez, B., Sher, A. and Tan, J. “High Throughput Cardiac Science on the Grid”, Special issue of Transactions of the Royal Society. Phil. Trans. R. Soc. A 2010 368, 3907-3923. Abstract
Schmidberger, J., Bate, M., Reboul, C., Androulakis, S., Phan, J., Whisstock, J., Goscinski, W., Abramson, D. and Buckle, A. “MrGrid: A Portable Grid Based Molecular Replacement Pipeline”, PLoS ONE, April 2010, Volume 5, Issue 4. Abstract MRGRID_PLoS2010.pdf
Abramson,D., Bethwaite, B., Enticott, C., Garic,S., Peachey, T., Michailova,A., Amirriazi, S., "Embedding optimization in computational science workflows", Elsevier, Journal of Computational Science 1, 2010, pp 41-47 Abstract JOCS15.pdf
Arzberger, P., Wienhausen, G., Abramson, D., Date, S., Lin, F-P., Nan, K. and Shimojo, S., “PRIME: an integrated and sustainable undergraduate international research program”, Advances in Engineering Education, American Society for Engineering Education, Summer 2010, Volume 2, Number 2. Abstract http://advances.asee.org/wp-content/uploads/vol02/issue02/papers/aee-vol02-issue02-p05.pdf 
Chan, P and Abramson, D. " Persistence and Communication State Transfer in an Asynchronous Pipe Mechanism”, International Journal of Grid and High Performance Computing, Vol. 1, Issue 3, 2009, Pages: 18-36. Abstract IJGHPC2009_F.pdf
Abramson, D.A.,Chu, C.,Kurniawan, D.,Searle, A., 2009, Relative Debugging in an integrated development environment in Software - Practice and Experience, 2009:pp 1157-1183; John Wiley&Sons Ltd. Abstract
Ramdas, T., Egan, G. K., Abramson, D. A., & Baldridge, K. K. (2009), ‘ERI Sorting for Emerging Processor Architectures’, Computer Physics Communications, Elsevier, 2009 Abstract
Ayyub, S., Abramson, D., Enticott, C., Garic, S., Tan, J. “Fault-tolerant execution of large parameter sweep applications across multiple VOs with storage constraints”, Concurrency and Computation: Practice and Experience. Currently Online, 25/8/2008, Abstract fault_tolerant_shahaan.pdf
Goscinski, W. and Abramson, D. “Parallel Programming on a High Performance Application-runtime”, Concurrency and Computation: Practice and Experience. June 2008. doi:10.1002/cpe.1325 Abstract virtmach.pdf
Tan, J., Abramson, D. & Enticott,C," REMUS: A Rerouting and Multiplexing System for Grid Connectivity Across Firewalls", Journal of Grid Computing, Springer Netherlands ISSN 1570-7873 (Print) 1572-9814 (Online),DOI 10.1007/s10723-008-9104-1, 28 June 2008 Abstract remus_jgridc.pdf
Ramdas, T., Abramson, D., Egan, G. & Baldridge, K. “On ERI Sorting for SIMD Execution of Large-Scale Hartree-Fock SCF”, Comp. Phys. Commun., doi:10.1016/j.cpc.2008.01.045, 2008. Abstract ERISortingKB.pdf
Peachey, T. C., Diamond, N. T., Abramson, D. A. Sudholt, W., Michailova, A. Amirriazi, S., “Fractional Factorial Design for Parameter Sweep Experiments using Nimrod/E”, Journal of Scientific Programming, Volume 16, Numbers 2,3, 2008. Abstract
Ramdas, T., Abramson, D., Egan, G. & Baldridge, K. “Uniting extrinsic vectorization and shell structure for efficient SIMD evaluation of Electron Repulsion Integrals”, to appear, J. Chem. Phys. Vol 349/1-3 pp 147-157, doi:10.1016/j.chemphys.2008.02.038 Abstract SIMDEval_ERI_Tirath.pdf
Lynch, A. H., D. Abramson, K. J. Beringer, and P. Uotila (2007), Influence of savanna fire on Australian monsoon season precipitation and circulation as simulated using a distributed computing environment, Geophys. Res. Lett., 34, L20801, doi:10.1029/2007GL030879. Abstract geophys_lynch.pdf
Zheng C, Katz M, Papadopoulos P, Abramson D, Ayyub S, Enticott C, Garic S, Goscinski W, Arzberger P, Lee B S, Phatanapherom S, Sriprayoonsakul S, Uthayopas P, Tanaka Y, Tanimura Y, Tatebe O. “Lessons Learned Through Driving Science Applications in the PRAGMA Grid.” Int. J. Web and Grid Services, Vol.3, No.3, pp 287- 312. 2007 Abstract Zheng_IJWGS.pdf
Ramdas, T., Abramson, D., Egan, G. & Baldridge, K. “Towards a special-purpose massively parallel computer for ab initio quantum chemistry: What’s on the table, and how do we take it?”, Theoretical Chemistry Accounts: Theory, Computation, and Modeling (Theoretica Chimica Acta), doi:10.1007/s00214-007-0306-6, Springer Berlin / Heidelberg, 1432-881X (Print) 1432-2234 (Online), April 28, 2007 Abstract specpurpcompMM.pdf
Pillai, B., Premaratne, M., Abramson, D., Lee, K., Nirmalathas, A., Lim, C., Shinada, S., Wada, N., and Miyazaki, T., “Analytical Characterization of Optical Pulse Propagation in Polarization-Sensitive Semiconductor Optical Amplifiers”, IEEE Journal of Quantum Electronics, Vol. 42, No. 10, October 2006. Abstract pillai_optamp.pdf
Lewis, A. Abramson, D. and Peachey, T., "RSCS: A Parallel Simplex Algorithm for the Nimrod/O Optimization Toolset", Scientific Programming, 14(1), 1-11 (2006). IOS Press. Abstract Full Text.pdf 
Jones R., Peng D., Chaperon P., Tan M., Abramson D. and Peachey T., "Structural Optimization with Damage Tolerance Constraints", Theoretical and Applied Fracture Mechanics, 43, 2005, pp. 133-155. Abstract Theoretical and Applied Fracture Mechanics 
Sudholt, W., Baldridge, K., Abramson, D., Enticott, C. and Garic, S., “Application of grid computing to parameter sweeps and optimizations in molecular modeling”, Future Generation Computer Systems, 21 (2005), 27-35. Also appeared in International Conference on Computational Sciences, ICCS04, Krakow Poland, June 6 – 9, 2004. Abstract gamess2.pdf
Buyya, R., Date, S., Mizuno-Matsumoto, Y., Venugopal, S. and Abramson, D. “Neuroscience Instrumentation and Distributed Analysis of Brain Activity Data: A Case for eScience on Global Grids”, Journal of Concurrency and Computation: Practice and Experience (CCPE), Volume 17, No. 15, 1783-1798pp, Wiley Press, New York, USA, Dec. 2005. Abstract
Buyya, R., Abramson, D. and Venugopal, S. “The Grid Economy”, Special Issue on Grid Computing, Proceedings of the IEEE, Manish Parashar and Craig Lee (editors), Volume 93, Issue 3, 698-714pp, IEEE Press, New York, USA, March 2005 Abstract buyya05economy.pdf
Buyya, R., Murshed, M, Abramson, D. and Venugopal, S. “Scheduling Parameter Sweep Applications on Global Grids: A Deadline and Budget Constrained Cost-Time Optimisation Algorithm”, International Journal of Software: Practice and Experience (SPE), Volume 35, Issue 5, pp 491 - 512, Wiley Press, New York, USA, April 25, 2005. Abstract spe-db.pdf
Sudholt, W., Baldridge, K., Abramson, D., Enticott, C. and Garic, S. “Parameter Scan of an Effective Group Difference Pseudopotential Using Grid Computing”, New Generation Computing 22 (2004) 125-135 Abstract gamess.pdf
Beasley, J.E., Krishnamoorthy, M., Sharaiha, Y.M. and Abramson, D., “Displacement problem and dynamically scheduling aircraft landings" J. Opl Res.Soc. 55 (2004) 54-64. Abstract
Smith, K. A., Abramson, D. and Duke, D., "Hopfield Neural Networks for Timetabling: Formulations, Methods, and Comparative Results", Computers & Industrial Engineering, 44 (2003), pp 283 - 305 Abstract cie2003.pdf
Buyya, R., Branson, K., Giddy, J. Abramson, D., “The Virtual Laboratory: Enabling On Demand Drug Design with the Worldwide Grid”, Concurrency and Computation: Practice and Experience, 15(1), 2003 Abstract vlab-drug-design.pdf
Abramson, D and Watson, G. “Debugging Scientific Applications in the .NET Framework”, Future Generation Computer Systems, Vol. 19 issue 5, June 2003., pp 665 - 678 Abstract VSGuard1.pdf
Tran, N., Mingins, C., and Abramson, D., “Design and Implementation of Assertions for the Common Language Infrastructure”, IEE Proceedings - Software, 150(5), October 2003, pp. 329-336 Abstract managed.pdf
Buyya, R, Abramson, D. Giddy, J and Stockinger, H. “Economic Models for Resource Management and Scheduling in Grid Computing”, Journal of Concurrency: Practice and Experience, Grid computing special issue 14/13-15, 2002, pp 1507 - 1542 Abstract jcpe.pdf
Abramson, D, Buyya, R. and Giddy, J. “A Computational Economy for Grid Computing and its Implementation in the Nimrod-G Resource Broker”, Future Generation Computer Systems. Volume 18, Issue 8, Oct-2002. Abstract fgcs.pdf
Randall, M. and Abramson, D “A General Meta-Heuristic Based Solver for Combinatorial Optimisation Problems ", Combinatorial Optimisation and Applications (COAP)., 20, 2001, pp 185 – 210. Abstract genpap.pdf
Watson, G., Abramson, D., 2000, Relative Debugging for Data-Parallel Programs: A ZPL Case Study, IEEE Concurrency, vol 8 issue 4, IEEE Computer Society, New York NY USA, pp. 42-52 Abstract reldebug_zpl.pdf
Abramson, D., Kommineni, J., McGregor, J. and Katzfey, J, (2005). “An Atmospheric Sciences Workflow and its Implementation with Web Services”, Future Generation Computer Systems, 21, 2005, pp 69 – 78. Also appeared in The International Conference on Computational Sciences, ICCS04, Krakow Poland, June 6 – 9, 2004. Abstract atmos.pdf
Beasley, J.E., Krishnamoorthy, M, Sharaiha, Y.M., Abramson, D.A. “Scheduling Aircraft Landings - the Static Case”, Transportation Science, vol. 34, 2000, pp180-197. Abstract sched_aircraft_static.pdf
Abramson, D. A. and Randall, M. “A Simulated Annealing code for General Integer Linear Programs”, Annals of Operations Research 86(1999) Abstract co96.pdf
Abramson, D.A. , Dang, H. and Krisnamoorthy, M., "Simulated Annealing Cooling Schedules for the School Timetabling Problem", Asia-Pacific Journal of Operational Research, 16 (1999) 1-22. Abstract simu_anneal_cool.pdf
Smith, K. A., Abramson, D. A., Duke, D., 1998, Hopfield Neural Networks for Timetabling: Formulations, Methods and Comparative Results, in Business Systems Research Vol I, School of Business Systems, Clayton Vic Australia, pp. 196-224. Abstract cie2003.pdf
De Silva, A. and Abramson, D. A. "A Parallel Interior Point Method and its Application to Facility Location Problems", Computational Optimization and Applications, Volume 9, Number 3, March 98, pp 249 – 273 Abstract fac.pdf
Sosic, R., Abramson, D. A., 1997:Guard: a relative debugger, Software - Practice & Experience, vol 27, John Wiley & Sons, Ltd, California USA, pp. 185-206. Abstract guard.pdf
Abramson, D.A. and Sosic, R. "A Debugging and Testing Tool for Supporting Software Evolution", Journal of Automated Software Engineering, 3 (1996), pp 369 - 390 Abstract jase.pdf
Abramson D., Foster, I., Michalakes, J. and Sosic R., "Relative Debugging: A new paradigm for debugging scientific applications", the Communications of the Association for Computing Machinery (CACM), Vol 39, No 11, pp 67 - 77, Nov 1996 Abstract cacm1.pdf
Abramson, D., Dang, H. and Krishnamoorthy, M. "A Comparison of Two Methods for Solving 0-1 Integer Programs Using a General Purpose Simulated Annealing", Annals of Operations Research, 63 (1996), pp 129 - 150 Abstract gpsa.pdf
McKay, A. and Abramson, D. "Evaluating the Performance of a SISAL implementation of the Abingdon Cross Image Processing Benchmark", International Journal of Parallel Programming, Vol 33, Number 2, pp 105 - 134, 1995. Abstract abingdon.pdf
Rotstayn, L., Francis, R., Abramson, D. and Dix, M. "Suitability of GCM physics for execution on SIMD parallel computers", J. Meteor. Soc. Japan, Vol 71,1993 . pp 297-303. Abstract gcm4_simd_comps.pdf
Abramson, D.A., "A Very High Speed Architecture to Support Simulated Annealing", IEEE Computer, May 1992, pp 27 - 34. Abstract vhighspeed_arch_sim_anneal.pdf
Rosenberg, J. Keedy, J. L. and Abramson "Addressing Mechanisms for Large virtual Memories", The Computer Journal, August 1992. Abstract addressing_largevm.pdf
Abramson, D. A. "Constructing School Timetables using Simulated Annealing: Sequential and Parallel Algorithms", Management Science, Vol 37, No 1, Jan 1991, pp 98 - 113 Abstract timetable.pdf
Abramson, D and Egan, G, "The RMIT Dataflow Computer: A Hybrid Architecture", The Computer Journal, Vol 33, No 3, June 1990, pp 230 - 240. Abstract rmit_dfcomp_hybrid_arch.pdf
Abramson, D.A., Ramamohanarao, K., and Ross, M, "A Scalable Cache Coherence Algorithm using a Selectively Clearable Cache Memory", Australian Computer Journal, Vol 21, No 1, Feb 1989. Abstract scalable_cache_mech.pdf
Abramson, D, and Egan, G. " An Overview of the RMIT/CSIRO Parallel Systems Architecture Project", Australian Computer Journal, Vol 20, No 3, August 1988. Abstract
Technical Report
Peachey, T.C., Diamond, N.T., Abramson, D. and Enticott, C.M. (2012). Computing Factorial Designs for Large Numbers of Factors with 2^m levels. Monash eScience and Grid Engineering Laboratory: Melbourne (Australia). 2012:1 Abstract NewAlgrev2.pdf
Peachey, T.C., Abramson, D., Lewis, A. (2012). Heuristics for Parallel Simulated Annealing by Speculation. Monash eScience and Grid Engineering Laboratory, Melbourne (Australia). 2012:2 Abstract parallelSA.pdf
Unrefereed
Abramson, D and Giddy, J. “Scheduling Large Parametric Modelling Experiments on a Distributed Meta-computer”, PCW '97, September 25 and 26, 1997, Australian National University, Canberra, pp P2-H-1 – P2-H-8 Abstract nimrodg.pdf
Abramson, D. “Parametric Modelling: Killer Apps for Linux Clusters”, The Linux Journal, #73, May 2000, pp 84 – 91. Abstract killerapps_cluster.pdf
Abramson, D and Watson, G. “Relative Debugging for Parallel Systems”, PCW '97, September 25 and 26, 1997, Australian National University, Canberra, pp P1-C-1 – P1-C-8. Abstract guardpcw.pdf
Abramson, D.A. and Rosenberg, J. "Hardware Support for Program Debuggers in a Paged Virtual Memory", Computer Architecture News, June 1983, Vol 11, No 2, pp 8-19. Abstract hardsupp_pagedvm.pdf

Publications: 240